feat(preprocess): add resumable DWH jobs

This commit is contained in:
2026-07-12 05:34:38 +02:00
parent 2624d1d342
commit 3a9808f126
6 changed files with 323 additions and 20 deletions
+83
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@@ -0,0 +1,83 @@
import hashlib
import json
from typer.testing import CliRunner
from tht.cli import app
from tht.jobs.dwh_pipeline import DwhPreprocessPipeline
from tht.jobs.locking import _lock_name
FP = "sha256:" + hashlib.sha256(b"test").hexdigest()
def test_dwh_and_evidence_jobs_have_distinct_lock_names():
assert _lock_name("demo", "dwh") != _lock_name("demo", "evidence")
def test_selected_dwh_stages_run_in_declared_order(tmp_path):
calls = []
pipeline = DwhPreprocessPipeline(
workspace_id="demo",
workspace_root=tmp_path,
config_fingerprint=FP,
input_fingerprint=FP,
introspect=lambda: calls.append("introspect"),
build_lsh=lambda: calls.append("lsh"),
)
report = pipeline.run(("introspect", "lsh"))
assert report.status == "succeeded"
assert calls == ["introspect", "lsh"]
assert [stage.name for stage in report.stages] == ["introspect", "lsh"]
def test_preprocess_dwh_json_is_pristine(monkeypatch, tmp_path):
import tht.cli.preprocess_cmd as command
class Report:
status = "succeeded"
def model_dump(self, mode=None):
return {"status": "succeeded", "run_id": "a" * 32, "stages": []}
seen = {}
def run(config, *, steps, resume):
seen.update(config=config, steps=steps, resume=resume)
return Report()
monkeypatch.setattr(command, "run_dwh_from_config", run)
response = CliRunner().invoke(
app,
[
"preprocess", "dwh", "--steps", "introspect,lsh", "--json",
"-c", str(tmp_path / "workspace.yaml"),
],
)
assert response.exit_code == 0, response.output
assert json.loads(response.output)["run_id"] == "a" * 32
assert seen["steps"] == ("introspect", "lsh")
def test_preprocess_dwh_rejects_unknown_or_duplicate_steps(monkeypatch, tmp_path):
import tht.cli.preprocess_cmd as command
called = False
def forbidden(*args, **kwargs):
nonlocal called
called = True
monkeypatch.setattr(command, "run_dwh_from_config", forbidden)
runner = CliRunner()
for value in ("introspect,unknown", "lsh,lsh", ""):
response = runner.invoke(
app,
["preprocess", "dwh", "--steps", value, "--json", "-c", str(tmp_path / "w.yaml")],
)
assert response.exit_code == 2
assert json.loads(response.output)["status"] == "failed"
assert called is False
+66
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@@ -0,0 +1,66 @@
import hashlib
from tht.jobs.dwh_pipeline import DwhPreprocessPipeline
FP = "sha256:" + hashlib.sha256(b"test").hexdigest()
def test_lsh_failure_resumes_exact_run_without_repeating_introspection(tmp_path):
calls = []
def introspect():
calls.append("introspect")
def fail_lsh():
calls.append("lsh-failed")
raise RuntimeError("database detail that must not leak")
failed = DwhPreprocessPipeline(
workspace_id="demo",
workspace_root=tmp_path,
config_fingerprint=FP,
input_fingerprint=FP,
introspect=introspect,
build_lsh=fail_lsh,
).run(("introspect", "lsh"))
assert failed.status == "failed"
resumed = DwhPreprocessPipeline(
workspace_id="demo",
workspace_root=tmp_path,
config_fingerprint=FP,
input_fingerprint=FP,
introspect=introspect,
build_lsh=lambda: calls.append("lsh-recovered"),
).run(("introspect", "lsh"), resume_run_id=failed.run_id)
assert resumed.status == "succeeded"
assert resumed.resumed_from == failed.run_id
assert calls == ["introspect", "lsh-failed", "lsh-recovered"]
def test_resume_rejects_a_different_stage_selection(tmp_path):
failed = DwhPreprocessPipeline(
workspace_id="demo",
workspace_root=tmp_path,
config_fingerprint=FP,
input_fingerprint=FP,
introspect=lambda: None,
build_lsh=lambda: (_ for _ in ()).throw(RuntimeError()),
).run(("introspect", "lsh"))
pipeline = DwhPreprocessPipeline(
workspace_id="demo",
workspace_root=tmp_path,
config_fingerprint=FP,
input_fingerprint=FP,
introspect=lambda: None,
build_lsh=lambda: None,
)
try:
pipeline.run(("lsh",), resume_run_id=failed.run_id)
except Exception as error:
assert "incompatible" in str(error)
else:
raise AssertionError("resume with different stages must fail")
+22 -15
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@@ -36,12 +36,30 @@ def _extract_lsh_values(dwh, physical, annotations, limit):
return values, skipped, truncated
@lsh_app.command("build")
def build_cmd(config: Path = CONFIG_OPT) -> None:
"""Costruisce l'indice LSH dai valori del database e lo salva su pickle."""
def build_lsh_artifacts(cfg, *, dwh=None, verbose: bool = False):
"""Run the existing LSH extraction/build algorithm and persist its outputs."""
from tht.adapters.factory import build_dwh
from tht.cli.schema_cmd import annotations_path
from tht.lshindex import build_index, save_index
from tht.mschema.models import Annotations, PhysicalSchema
phys_file = physical_path(cfg)
if not phys_file.exists():
raise FileNotFoundError("physical catalog is missing; run schema introspect first")
physical = PhysicalSchema.from_yaml(phys_file)
annotations = Annotations.from_yaml(annotations_path(cfg))
target = dwh if dwh is not None else build_dwh(cfg)
values, skipped, truncated = _extract_lsh_values(
target, physical, annotations, cfg.lsh.max_values_per_column
)
lsh, minhashes = build_index(values, cfg.lsh, verbose=verbose)
save_index(lsh, minhashes, cfg.lsh, _lsh_dir(cfg), name=cfg.database.db_schema)
return minhashes, skipped, truncated, values
@lsh_app.command("build")
def build_cmd(config: Path = CONFIG_OPT) -> None:
"""Costruisce l'indice LSH dai valori del database e lo salva su pickle."""
cfg = _load_config_or_exit(config)
phys_file = physical_path(cfg)
if not phys_file.exists():
@@ -50,17 +68,8 @@ def build_cmd(config: Path = CONFIG_OPT) -> None:
fg=typer.colors.RED, err=True,
)
raise typer.Exit(code=1)
physical = PhysicalSchema.from_yaml(phys_file)
from tht.cli.schema_cmd import annotations_path
annotations = Annotations.from_yaml(annotations_path(cfg))
typer.echo("Estrazione valori (i più frequenti) dalle colonne testuali eligible...")
from tht.adapters.factory import build_dwh
dwh = build_dwh(cfg)
values, skipped, truncated = _extract_lsh_values(
dwh, physical, annotations, cfg.lsh.max_values_per_column
)
minhashes, skipped, truncated, values = build_lsh_artifacts(cfg, verbose=True)
n_values = sum(len(v) for t in values.values() for v in t.values())
typer.echo(f" {n_values} valori da {sum(len(t) for t in values.values())} colonne")
for s in skipped:
@@ -72,8 +81,6 @@ def build_cmd(config: Path = CONFIG_OPT) -> None:
fg=typer.colors.YELLOW,
)
lsh, minhashes = build_index(values, cfg.lsh, verbose=True)
save_index(lsh, minhashes, cfg.lsh, _lsh_dir(cfg), name=cfg.database.db_schema)
typer.secho(
f"OK: indice LSH ({len(minhashes)} entry) -> {_lsh_dir(cfg)}", fg=typer.colors.GREEN
)
+76
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@@ -15,6 +15,39 @@ from tht.cli.config_cmd import CONFIG_OPT
preprocess_app = typer.Typer(help="Materialize versioned preprocessing artifacts")
def run_dwh_from_config(
config: Path, *, steps: tuple[str, ...], resume: str | None = None,
):
from tht.cli.lsh_cmd import build_lsh_artifacts
from tht.cli.schema_cmd import _load_config_or_exit, refresh_catalog
from tht.jobs.dwh_pipeline import DwhPreprocessPipeline, fingerprint
cfg = _load_config_or_exit(config)
workspace_root = cfg.paths.artifacts.parent
pipeline = DwhPreprocessPipeline(
workspace_id=config.stem.lower().replace(".", "-").replace("_", "-"),
workspace_root=workspace_root,
config_fingerprint=fingerprint(cfg.model_dump_json()),
input_fingerprint=fingerprint(config.resolve().as_posix()),
introspect=lambda: refresh_catalog(cfg),
build_lsh=lambda: build_lsh_artifacts(cfg),
)
return pipeline.run(steps, resume_run_id=resume)
def _parse_dwh_steps(value: str) -> tuple[str, ...]:
allowed = ("introspect", "lsh")
steps = tuple(part.strip() for part in value.split(",") if part.strip())
if (
not steps
or len(steps) != len(set(steps))
or any(step not in allowed for step in steps)
or tuple(sorted(steps, key=allowed.index)) != steps
):
raise ValueError("steps must be a unique ordered subset of introspect,lsh")
return steps
def run_from_config(config: Path, *, dry_run: bool = False, resume: str | None = None):
from tht.adapters.factory import build_evidence_sources, build_vector_store
from tht.cli.schema_cmd import _load_config_or_exit
@@ -122,3 +155,46 @@ def evidence_cmd(
f"OK: run={payload['run_id']} generation={payload['generation']} changed={len(payload['changed'])} "
f"unchanged={len(payload['unchanged'])} removed={len(payload['removed'])}"
)
@preprocess_app.command("dwh")
def dwh_cmd(
config: Path = CONFIG_OPT,
steps: str = typer.Option("introspect,lsh", "--steps"),
resume: str | None = typer.Option(None, "--resume"),
json_output: bool = typer.Option(False, "--json"),
) -> None:
try:
selected = _parse_dwh_steps(steps)
except ValueError:
payload = {"status": "failed", "error": "invalid DWH preprocessing steps"}
if json_output:
typer.echo(json.dumps(payload, sort_keys=True))
else:
typer.secho("ERRORE: invalid DWH preprocessing steps", fg=typer.colors.RED, err=True)
raise typer.Exit(code=2) from None
if resume is not None and re.fullmatch(r"[0-9a-f]{32}", resume) is None:
payload = {"status": "failed", "error": "resume requires a preprocessing run id"}
if json_output:
typer.echo(json.dumps(payload, sort_keys=True))
else:
typer.secho("ERRORE: resume requires a preprocessing run id", fg=typer.colors.RED, err=True)
raise typer.Exit(code=2)
try:
result = run_dwh_from_config(config, steps=selected, resume=resume)
except Exception:
payload = {"status": "failed", "error": "DWH preprocessing failed"}
if json_output:
typer.echo(json.dumps(payload, sort_keys=True))
else:
typer.secho("ERRORE: DWH preprocessing failed", fg=typer.colors.RED, err=True)
raise typer.Exit(code=1) from None
payload = result.model_dump(mode="json")
if json_output:
typer.echo(json.dumps(payload, ensure_ascii=False, sort_keys=True))
elif result.status == "succeeded":
typer.echo(f"OK: run={result.run_id} stages={','.join(selected)}")
else:
typer.secho(f"ERRORE: run={result.run_id} DWH preprocessing failed", fg=typer.colors.RED, err=True)
if result.status != "succeeded":
raise typer.Exit(code=1)
+11 -5
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@@ -44,6 +44,16 @@ def annotations_path(cfg) -> Path:
return cfg.paths.artifacts / "mschema" / "annotations.yaml"
def refresh_catalog(cfg, *, dwh=None):
"""Run the existing catalog algorithm and persist its canonical output."""
target = dwh if dwh is not None else build_dwh(cfg)
physical = target.introspect()
_add_examples(target, physical, cfg.examples)
classify_all(physical, cfg.eligibility)
physical.to_yaml(physical_path(cfg))
return physical
@schema_app.command("introspect")
def introspect_cmd(
config: Path = CONFIG_OPT,
@@ -80,14 +90,10 @@ def introspect_cmd(
)
return
try:
dwh = build_dwh(cfg)
phys = dwh.introspect()
_add_examples(dwh, phys, cfg.examples)
classify_all(phys, cfg.eligibility)
phys = refresh_catalog(cfg)
except Exception as e:
typer.secho(f"ERRORE: {e}", fg=typer.colors.RED, err=True)
raise typer.Exit(code=1)
phys.to_yaml(out)
n_cols = sum(len(t.columns) for t in phys.tables.values())
n_ignored = sum(
1 for t in phys.tables.values() for c in t.columns.values() if not c.eligible
+65
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@@ -0,0 +1,65 @@
"""Resumable DWH catalog and LSH preprocessing stages."""
from __future__ import annotations
import hashlib
from collections.abc import Callable
from pathlib import Path
from tht.jobs.models import JobReport, JobSpec
from tht.jobs.runner import run_job
DWH_STAGE_IDS = ("introspect", "lsh")
class DwhPreprocessPipeline:
"""Adapt existing DWH preprocessing operations to the shared job envelope."""
def __init__(
self,
*,
workspace_id: str,
workspace_root: Path,
config_fingerprint: str,
input_fingerprint: str,
introspect: Callable[[], object],
build_lsh: Callable[[], object],
) -> None:
self.workspace_id = workspace_id
self.workspace_root = workspace_root
self.config_fingerprint = config_fingerprint
self.input_fingerprint = input_fingerprint
self._operations = {"introspect": introspect, "lsh": build_lsh}
def run(
self, steps: tuple[str, ...] = DWH_STAGE_IDS, *, resume_run_id: str | None = None
) -> JobReport:
if not steps or len(steps) != len(set(steps)) or any(
step not in DWH_STAGE_IDS for step in steps
):
raise ValueError("DWH preprocessing steps must be unique introspect/lsh stages")
if tuple(sorted(steps, key=DWH_STAGE_IDS.index)) != steps:
raise ValueError("DWH preprocessing steps must follow introspect,lsh order")
spec = JobSpec(
workspace_id=self.workspace_id,
job_type="dwh",
workspace_root=self.workspace_root,
spec_version="jobs-v1",
pipeline_version="dwh-v1",
config_fingerprint=self.config_fingerprint,
input_fingerprint=self.input_fingerprint,
stage_ids=steps,
resume_run_id=resume_run_id,
)
def stage(operation):
def execute(_context):
return operation()
return execute
return run_job(spec, tuple(stage(self._operations[step]) for step in steps))
def fingerprint(value: str) -> str:
return "sha256:" + hashlib.sha256(value.encode("utf-8")).hexdigest()