6.9 KiB
6.9 KiB
Outline v4 — Role of AI in the Analysis of Unstructured Clinical Databases
Updated 2026-09-18 against the actual deck, rather than the earlier proposed structure.
Deck: ../deck/index.html — Reveal.js 5.1.0, 14 slides, 16:9
(1280 × 720), with local fonts and speaker notes on every slide.
Review status: ../prototype/deck-overview.html.
The titles below are the actual slide headings; some overview labels are shorter or older.
Presenters: MP = Dr. Marco Pancotti · SP = Dr.ssa Sara Paratico. The notes explicitly identify Sara on slides 05–08. The final handoff around slide 04 and the remaining speaker allocation should be confirmed during rehearsal. Per-slide timings and total running time need a new rehearsal; the previous 15-slide timing estimate no longer describes this deck.
Actual slide sequence
| # | Actual slide title | Content / format | Slide review status | Speaker notes |
|---|---|---|---|---|
| 01 | Role of AI in the Analysis of Unstructured Clinical Databases | AritmoLab introduction, clinical data platform and presenters | FINAL | Present; no DRAFT marker |
| 02 | Four islands and four missing pieces | Interactive map: Cardioref, Genetic data, Omics Portal and ECG subsystems; Clinical Intelligence, Datawarehouse, ML-ready data and Professional Portal as missing pieces | FINAL | Present; no DRAFT marker |
| 03 | What we wanted to build | Architecture and data flow toward the patient portal and research warehouse; clickable AI contribution cards | FINAL | Present; no DRAFT marker |
| 04 | The clinical truth lives in unstructured columns | Italian clinical sentence with English translation; why free text needs structured interpretation | FINAL | DRAFT |
| 05 | Deterministic AI, audited numbers | Text-mining outputs: 58,438 letters, 73,389 pathologies, 10,908 tests and 2,307 Brugada patients; extraction pipeline | FINAL | DRAFT — Sara |
| 06 | Reading clinical text is not keyword matching | Clinical NLP challenges, including negation and distinguishing family history from the patient's conditions | FINAL | DRAFT — Sara |
| 07 | Two tiers, one clinical order | Clinical ontology: 11 arrhythmic and 5 structural categories; text becomes recorded data | FINAL | DRAFT — Sara |
| 08 | Trusting the text is a process, not a promise | Five centered detail lenses: four validation controls and the three advantages | REFINED | ~120 words; five hover cues |
| 09 | AritmoLab — a quick tour | Portal tour; currently six screenshot placeholders | DRAFT | DRAFT |
| 10 | The warehouse speaks SQL. Research needs more. | Gap between the warehouse and clinical/research use: SQL access, aggregates and research cohorts | DRAFT | DRAFT |
| 11 | Ask the warehouse in plain English | ThothII: natural-language question, SQL proposal, human review and a research-ready datamart | DRAFT | DRAFT |
| 12 | From question to datamart — the app | ThothII walkthrough; currently six screenshot placeholders | DRAFT | DRAFT |
| 13 | One datamart — many questions answered | Multivariate analysis and machine learning; two chart placeholders with an illustrative-data disclosure | DRAFT | DRAFT — charts still to be created |
| 14 | Thank you | Questions and invitation to future technical walkthroughs on Substack | DRAFT | DRAFT |
FINAL and REFINED reproduce the overview's recorded review status. They do not imply
that speaker notes or clinical claims have received a separate final validation.
Figures above describe the content currently displayed in the deck.
Current presentation behavior
- Slide 02 has four clickable source systems and four clickable missing pieces, each opening an explanatory popup.
- Slide 03 has clickable brain icons that open AI contribution cards with a connector to the selected icon.
- Slide 08 has four centered lens popups. In the presenter console, hovering over a numbered control or its corresponding heading in the notes opens the detail in both preview and audience view. Escape closes it. Its quality wording separates the original procedure-accuracy target from pathology coverage. The ~893 false-positive records and v1.3.1 negation fix are confirmed in the ETL sources; see source notes for precise scope and limitations.
- Its advantages panel highlights on hover and opens a fifth centered lens on click, explaining speed, precision and determinism. The fifth speaker-note cue and presenter control open the same popup.
- Slide changes use a fade transition. Popups fade in and their cards move/scale into place; clickable source icons and brain buttons have hover effects.
- A dropdown on each slide jumps to another slide. Reveal.js provides keyboard navigation and the overview.
- The
Skey opens the Reveal.js speaker view when served locally. Speaker scripts live in each slide's<aside class="notes">indeck/index.html. - Source Sans 3 and Source Serif 4 are bundled under
deck/fonts/; the deck does not depend on Google Fonts.
Remaining work
- Review slide 08 for final approval and slides 09–14 individually.
- Replace the six placeholders on slide 09 with real anonymized or demo portal screenshots. The in-slide authoring note still requests 6–7 screenshots; settle that count when inserting the images.
- Replace the six placeholders on slide 12 with screenshots of the ThothII workflow. Its authoring note likewise still requests 6–7 screenshots.
- Create the two charts on slide 13, identify the supporting literature, and preserve the disclosure if the data remain illustrative rather than measured results.
- Validate the speaker scripts on slides 04–14, including Sara's clinical section on slides 05–08, and confirm the handoff between presenters.
- Confirm the “twenty years” wording, clinical figures, and quality-gate claims before presenting them as final facts.
- Confirm the closing Substack reference and whether the promised videos will be available by the talk.
- Rehearse the actual 14-slide sequence and set timings, including popup explanations and any live demo chosen in addition to the screenshot walkthroughs.
The previous standalone slides on AI co-engineering, genetic reconciliation, lessons learned and a live-demo divider are not separate slides in the current sequence. Their old slide numbers, review tasks and timings should not be reused.
Local preview
From the repository root:
python3 -m http.server 8000 --bind 127.0.0.1 --directory presentation
- Deck: http://localhost:8000/deck/index.html
- Review overview: http://localhost:8000/prototype/deck-overview.html
- Presenter console: http://localhost:8000/presenter/ — notes, interactive preview,
popup controls and a separate audience window for an extended HDMI display.
See
../presenter/README.mdfor operation and scope.
Keep presentation/ as the server root: the overview uses absolute /deck/ URLs.
Stop the server with Ctrl+C.