Embedded in the Omics Portal the SPA sits to the right of the portal sidebar,
but dialogs used `fixed left-1/2` — centered on the whole browser window, so
gates rendered visibly off-center (overlapping the sidebar).
- AppShell publishes the app area's horizontal geometry (--app-area-left/width)
as CSS vars on <html> via ResizeObserver + window resize.
- DialogContent centers on those vars (falls back to the viewport when the app
is standalone, where the two coincide).
- ArtifactGateWidget: narrower — cap at 52rem instead of 70vw.
- tools/replay: resume now returns {id, alreadyActive} JSON — the post-f979ada
frontend reads result.alreadyActive and a bare 204 broke replay resume.
Verified on the replay harness: with a simulated 300px portal sidebar the gate
centers on the app area (center 790 = 300 + 980/2); standalone unchanged.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Gate (tht-gate.js):
- Pre-validate decision types against workflow.yaml before showing reviewer widget
- Reject decisions emitted by later phases (min-phase check)
- Copy top-level `kind` into artifact when model forgets it (prevents loop)
- Force-advance on reviewer_decide/schema_linking when advance:true — skip
redundant reviewer_confirm gate
Backend:
- Emit agent_end on clean Pi exit (code 0 + bridge idle) instead of marking failed
Frontend:
- Strip <think> tags from transcript and activity panel
- Fix mermaid render with offscreen container + cleanup
- Graceful mermaid error: show source code instead of red error, fall back to table
Workflow:
- F2 now emits table_promoted and table_excluded (early schema linking decisions)
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
Give live feedback that something is happening the moment a session starts
processing: the red stop dot in the composer beats with a soft heartbeat + halo
while the harness is actively working (running — not waiting at a gate or
finalized), and settles the instant the model hands control back to the reviewer
or the session ends. Ring/scale only (no layout properties animated); honors
prefers-reduced-motion.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
New session now refuses to spawn a Pi runtime that would only die in bootstrap
retrieval when the DWH/vector host is unreachable (e.g. a dropped VPN). Before
`session new`, POST /sessions probes the DWH via `tht db ping`; if it is down it
returns 503 {code:"dwh_unreachable"} with a clear message and creates nothing.
- Gated behind the THT_DWH_PRECHECK flag (default off), enabled only by the local
dev launcher (run-stack.sh) — containers/CI never pay the probe, and existing
tests that don't set it are unaffected.
- ThtRunner.dbPing() runs `tht db ping` with a 10s timeout (run() gains an optional
timeout that SIGKILLs a hung child).
- Frontend: apiFetch throws a typed ApiError (status + parsed payload); the new-
session composer shows the specific alert on `dwh_unreachable` instead of the
generic retry hint, keeping the question for retry.
Verified live on an isolated backend (precheck on + broken DWH host → 503
dwh_unreachable, no session created) and via unit tests (backend 228, frontend 308).
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Opening an in-progress session that has a live Pi runtime now reconnects to
its pending gate instead of the empty landing screen that read as "stopped".
Cold/completed sessions keep the read-only documents panel with its explicit
Resume, so a mere click never spawns a runtime. Backend GET /sessions now
reports a per-session `active` flag (live runtime bound) to drive this.
Also:
- "New session" now closes any open session detail panel (left box).
- The model-activity separator can be dragged to a full 50/50 split
(was capped at 576px); central-min still guards narrow viewports.
Test fixes uncovered along the way:
- Node 25 ships an experimental global localStorage that shadows jsdom's and
lacks clear(), failing every jsdom test at setup; install a spec-compliant
in-memory Storage (feature-detected, inert on CI/LTS).
- Fix 4 pre-existing session-mgmt tests that used an ambiguous getByText for a
session shown in both nav and header; target the nav item by test id.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
The central column was top-anchored with no fixed header, so the user's
question was never shown while the model worked and the activity/gate
content drifted upward. Render the active session's question as a sticky,
always-present first row of the central area so it stays evident and
anchored at the top of the form.
Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
The embedded mode sets VITE_BACKEND_URL=/datamart-builder/api (the nginx
proxy path), but the runtime-config policy only allowed /api. This caused
resolveBackendUrl() to throw at app startup, resulting in a blank SPA.
Add /datamart-builder/api and /datamart-builder/api/ to relativeBases and
test cases.
Unisce gli internals di Codex (secret-bundle, provider-credentials, auth upstream,
security hardening, CI multiarch) mantenendo le fix portal-specific:
- backend: configPath da THT_CONFIG (fix sessioni) + dataRoot di Codex; authMode 'upstream'
- Docker/compose: TENUTO il mio (verificato live: omics_network+alias, env_file, pi npm-g)
perche' il compose/Dockerfile/entrypoint di Codex sono accoppiati al suo modello
secret-bundle (tht doctor inesistente, secret-policy.sh). Adottabile in futuro.
- config.test.ts: preso Codex (superset)
Verificato: tsc clean, 132/132 vitest.
The FE derived 'working' purely as activeSession && !pendingWidget, so the
final workflow turn — the only one that ends without a follow-up gate —
left the spinner on forever (observed live: 21592s after F8 approve).
- SessionBridge maps Pi's agent_end -> SSE system_event {event: agent_end}
- PiProcessManager notifies the client (info error + synthetic agent_end)
when the child dies unexpectedly; expected teardowns stay silent
- sessionStore tracks agentActive (on: user entry/text_delta/ui_request,
off: agent_end); AppShell working now requires it; resume sets it
optimistically
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
- Extract shared statusBadgeClass() helper (src/viewers/statusBadge.ts) so
SqlViewer, CteResultViewer and PhaseSummaryViewer can't drift: ok/success/
passed/promoted render green (--success), warn renders amber (--warning),
error/failed stay destructive red, everything else stays neutral outline.
Previously CteResultViewer/PhaseSummaryViewer mapped "ok"/"promoted" to the
default badge variant, which is bg-primary (GSD red) — success states
rendered red.
- enrich.js: buildCteResultV2 now falls back preview.rows to [] instead of
null when last_test.preview_rows is missing (pre-upgrade ok records), and
CteResultViewer reads result.preview?.rows?.length with a null-safe
fallback so it degrades to the "No preview rows" empty state instead of
crashing.
- PhaseSummaryViewer: section.items is optional (model-authored sections can
be prose-only); render (section.items ?? []) instead of crashing.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Add CtePlanViewer, CteResultViewer, and PhaseSummaryViewer to render the
structured v2 payloads (schema_version: 2) the harness now emits for
artifact-gate widgets, per contracts.md. Extract PreviewGrid from
ResultsPanel as a reusable AG Grid component shared by CteResultViewer.
ArtifactView dispatches to the new viewers on a schema_version/shape
guard, falling back to the existing legacy renderers unchanged for
older sessions and replay fixtures.
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
marcopanandClaude Fable 5