feat: complete catalog-driven preprocessing

backend/test/catalog-schema-routes.test.ts

@@ -394,12 +394,19 @@ test("consolidates non-empty generated column descriptions and preserves curated
   expect(scan).not.toHaveBeenCalled();
 });
 
-test("consolidates generated descriptions for every column in a database", async () => {
+test("consolidates generated descriptions for every table and column in a database", async () => {
   const { app, repository, database, scan } = await setup();
   await seedCatalog(repository, database);
   const tables = await repository.listTables(database.id);
   const patients = tables.find((table) => table.name === "patients")!;
   const visits = tables.find((table) => table.name === "visits")!;
+  await repository.updateTableMetadata(
+    database.id,
+    patients.id,
+    patients.version,
+    "Curated patients",
+    "Generated patients",
+  );
   const patientId = (await repository.listColumns(database.id, patients.id))[0]!;
   const visitColumns = await repository.listColumns(database.id, visits.id);
   const visitId = visitColumns.find((column) => column.name === "id")!;
@@ -432,11 +439,16 @@ test("consolidates generated descriptions for every column in a database", async
   const response = await app.inject({
     method: "POST",
     url: `/catalog/databases/${database.id}/descriptions/consolidate`,
-    payload: { target: "database_columns" },
+    payload: { target: "database" },
   });
 
   expect(response.statusCode).toBe(200);
-  expect(response.json()).toEqual({ copied: 2, skipped: 1 });
+  expect(response.json()).toEqual({ copied: 3, skipped: 2 });
+  expect(await repository.getTable(database.id, patients.id)).toMatchObject({
+    description: "Generated patients",
+    generatedDescription: "Generated patients",
+    version: patients.version + 2,
+  });
   expect(await repository.getColumn(database.id, patients.id, patientId.id)).toMatchObject({
     description: "Generated patient identifier",
     generatedDescription: "Generated patient identifier",
@@ -529,6 +541,11 @@ test("strictly validates description consolidation database and target ids", asy
       url: `/catalog/databases/${database.id}/descriptions/consolidate`,
       payload: { target: "tables", targetIds: [table.id], unexpected: true },
     }),
+    app.inject({
+      method: "POST",
+      url: `/catalog/databases/${database.id}/descriptions/consolidate`,
+      payload: { target: "database", targetIds: [table.id] },
+    }),
     app.inject({
       method: "POST",
       url: `/catalog/databases/${database.id}/descriptions/consolidate`,
@@ -536,7 +553,7 @@ test("strictly validates description consolidation database and target ids", asy
     }),
   ]);
 
-  expect(responses.map((response) => response.statusCode)).toEqual([400, 400, 400, 400]);
+  expect(responses.map((response) => response.statusCode)).toEqual([400, 400, 400, 400, 400]);
   for (const response of responses) {
     expect(response.json()).toEqual({
       code: "description_consolidation_invalid",