feat: complete catalog-driven preprocessing

backend/test/catalog-description-generation.integration.test.ts

@@ -13,10 +13,12 @@ import { up as upSchemaSync } from "../src/catalog/migrations/003_catalog_schema
 import { up as upDescriptionGeneration } from "../src/catalog/migrations/005_description_generation_runs.js";
 import { up as upSensitiveDataFlag } from "../src/catalog/migrations/006_sensitive_data_flag.js";
 import { up as upSensitiveSuggestionRuns } from "../src/catalog/migrations/007_sensitive_data_suggestion_runs.js";
+import { up as upLogicalRelationships } from "../src/catalog/migrations/008_catalog_logical_relationships.js";
 import { up as upAiTokenUsage } from "../src/catalog/migrations/009_ai_token_usage.js";
 import { up as upCanonicalModelIds } from "../src/catalog/migrations/010_canonical_model_ids.js";
 import { up as upLocalSensitivityAnalysis } from "../src/catalog/migrations/011_local_sensitivity_analysis.js";
 import { up as upSensitivityReason } from "../src/catalog/migrations/012_sensitivity_reason.js";
+import { up as upCatalogPreprocessingState } from "../src/catalog/migrations/013_catalog_preprocessing_state.js";
 import { KyselyCatalogRepository, type CatalogDatabase } from "../src/catalog/repository.js";
 import { loadConfig } from "../src/config.js";
 import type { WorkspaceRegistry } from "../src/workspaces/registry.js";
@@ -52,10 +54,12 @@ test.skipIf(!dockerAvailable)("Fastify persists Description Generation success a
     await upSensitiveDataFlag(db);
     await upDescriptionGeneration(db);
     await upSensitiveSuggestionRuns(db);
+    await upLogicalRelationships(db);
     await upAiTokenUsage(db);
     await upCanonicalModelIds(db);
     await upLocalSensitivityAnalysis(db);
     await upSensitivityReason(db);
+    await upCatalogPreprocessingState(db);
     const repository = new KyselyCatalogRepository(db);
     const database = await repository.create({
       workspaceId: "psd-clinical",
@@ -282,7 +286,7 @@ test.skipIf(!dockerAvailable)("Fastify persists Description Generation success a
     expect(events.statusCode).toBe(200);
     expect(events.json().find((event: { level: string }) => event.level === "error")).toEqual(expect.objectContaining({
       level: "error",
-      message: `The model provider request failed. Affected Catalog Column target: ${status.id}.`,
+      message: 'The model provider request failed. Affected target: Column "patients.status".',
     }));
     expect(events.body).not.toMatch(/test-provider-secret|gpt-4\.1-mini|raw provider/i);