feat: implement metadata catalog database management
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# Separate physical and logical relationships
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ThothII persists each database-declared foreign-key constraint as an immutable Catalog
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Relationship with ordered column pairs, so composite keys retain their identity and the database
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remains the authority for physical structure. Curated or AI-inferred Logical Relationships will
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use a separate future model and lifecycle rather than being mixed with physical constraints or
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denormalized into textual column fields; this keeps synchronization authoritative without
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preventing later semantic enrichment.
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